STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXB13Homeobox protein Hox-B13. (284 aa)    
Predicted Functional Partners:
MEIS1
Meis homeobox 1.
    
 
 0.818
MEIS2
Homeobox protein Meis2 isoform c.
    
 
 0.715
ENSCJAP00000071518
Meis_PKNOX_N domain-containing protein.
    
 
 0.715
BRIP1
Uncharacterized protein.
      
 0.640
AR
Androgen receptor.
    
 
 0.531
PBX1
Pre-B-cell leukemia transcription factor 1 isoform 1.
    
 
 0.513
HOXB7
Homeobox protein Hox-B7.
    
 
0.494
TEAD4
Transcriptional enhancer factor TEF-3; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis.
   
   0.492
ENSCJAP00000075938
YBD domain-containing protein.
   
   0.492
PRRX2
Paired related homeobox 2.
    
 
 0.473
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.