STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA1Spermatogenesis associated 1. (460 aa)    
Predicted Functional Partners:
TLK1
Serine/threonine-protein kinase tousled-like 1 isoform 1.
    
   0.804
TLK2
Tousled like kinase 2.
    
   0.733
ASTN2
Astrotactin 2.
      
 0.492
CARD16
Caspase recruitment domain family member 16.
      
 0.490
SPATA6
Spermatogenesis-associated protein 6.
      
 0.490
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.489
MAGEB16
MAGE family member B16.
      
 0.488
SPACA6
Sperm acrosome associated 6.
      
 0.486
SPATA7
Spermatogenesis associated 7.
      
 0.442
SPATA4
Spermatogenesis associated 4.
      
 0.434
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.