STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHDHCholine dehydrogenase, mitochondrial. (594 aa)    
Predicted Functional Partners:
IFT52
Intraflagellar transport 52.
    
 0.954
TTC26
Tetratricopeptide repeat domain 26.
   
 0.949
IFT88
Intraflagellar transport 88.
    
 0.944
IFT57
Intraflagellar transport 57.
    
 0.944
ENSCJAP00000054910
Uncharacterized protein.
    
 0.944
IFT81
Intraflagellar transport protein 81 homolog isoform 1.
    
 0.940
CLUAP1
Clusterin associated protein 1.
    
 0.933
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.932
IFT80
WD_REPEATS_REGION domain-containing protein.
    
 0.929
MBOAT1
Membrane bound O-acyltransferase domain containing 1; Belongs to the membrane-bound acyltransferase family.
   
 
 0.901
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.