STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORL1Sortilin related receptor 1. (2307 aa)    
Predicted Functional Partners:
APP
Amyloid beta A4 protein isoform a.
    
 0.968
IGF2R
Insulin like growth factor 2 receptor.
    
 0.952
ENSCJAP00000067149
Uncharacterized protein.
   
 0.930
ENSCJAP00000069046
J domain-containing protein.
   
 0.930
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.910
CLTB
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.910
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.908
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
    
 
 0.901
PICALM
ENTH domain-containing protein.
   
 
 0.878
APOE
Apolipoprotein E.
    
 0.848
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.