STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNB3Neuronal acetylcholine receptor subunit beta-3. (458 aa)    
Predicted Functional Partners:
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
  
0.844
ENSCJAP00000062117
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.792
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
  
0.774
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
0.770
CAPN8
Calpain-8; Belongs to the peptidase C2 family.
      
 0.727
ENSCJAP00000065507
Uncharacterized protein.
  
0.717
CHRNB4
Cholinergic receptor nicotinic beta 4 subunit.
  
0.668
CHRNB2
Neuronal acetylcholine receptor subunit beta-2.
  
0.665
CHRNG
Cholinergic receptor nicotinic gamma subunit.
  
0.605
CHRNE
Cholinergic receptor nicotinic epsilon subunit.
  
0.599
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.