STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSDMENon-syndromic hearing impairment protein 5 isoform a. (496 aa)    
Predicted Functional Partners:
CASP3
Caspase 3; Belongs to the peptidase C14A family.
     
 0.785
OSBPL3
Oxysterol-binding protein; Belongs to the OSBP family.
 
    
 0.774
GSDMA
Gasdermin A.
      
 0.704
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
      
 0.663
GZMA
Granzyme A; Belongs to the peptidase S1 family.
     
 0.648
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
 
    
 0.646
GSDMD
Gasdermin D.
      
0.610
CASP9
Caspase 9; Belongs to the peptidase C14A family.
  
  
 0.579
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
      
 0.568
GRM7
Metabotropic glutamate receptor 7 isoform b.
      
 0.568
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.