STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLATPlasminogen activator; Belongs to the peptidase S1 family. (563 aa)    
Predicted Functional Partners:
SERPINE1
Serpin family E member 1; Belongs to the serpin family.
   
 0.999
SERPINB2
Serine proteinase inhibitor, clade B, member 2 (Predicted); Belongs to the serpin family.
    
 0.971
PLAUR
Urokinase plasminogen activator surface receptor isoform 1.
   
 0.950
PLG
Plasminogen; Belongs to the peptidase S1 family.
  
  
0.929
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
   
 0.878
IGHE
Immunoglobulin heavy constant epsilon.
    
  0.868
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
   
 0.851
ANXA2
Annexin.
   
 0.848
CD4
Ig-like domain-containing protein.
    
 0.847
VTN
SMB domain-containing protein.
   
 0.823
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.