STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERC2ELKS/RAB6-interacting/CAST family member 2. (964 aa)    
Predicted Functional Partners:
ENSCJAP00000057377
Regulating synaptic membrane exocytosis 2.
    
 
 0.911
LRPPRC
Leucine rich pentatricopeptide repeat containing.
      
 0.729
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 
 0.708
BSN
Bassoon presynaptic cytomatrix protein.
   
 
 0.630
DIRC1
Disrupted in renal carcinoma 1.
      
 0.604
DCT
Dopachrome tautomerase.
      
 0.581
RIMS3
Regulating synaptic membrane exocytosis protein 3.
    
 
 0.572
PTPRO
Protein tyrosine phosphatase receptor type O.
      
 0.564
CALML6
Calmodulin like 6.
      
 0.543
CABP4
Calcium-binding protein 4.
      
 0.525
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.