STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRYD7SPRY domain-containing protein 7 isoform 1. (196 aa)    
Predicted Functional Partners:
TRIM13
Tripartite motif containing 13.
   
 
 0.858
PDZD3
PDZ domain containing 3.
    
 
 0.518
SLC35E1
Solute carrier family 35 member E1.
      
 0.474
ABITRAM
Actin binding transcription modulator.
      
 0.459
HSDL1
Hydroxysteroid dehydrogenase like 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.457
SLC41A3
Solute carrier family 41 member 3.
      
 0.454
NIPAL3
NIPA like domain containing 3.
      
 0.446
AP1AR
Adaptor related protein complex 1 associated regulatory protein.
      
 0.424
SYNRG
Synergin gamma isoform 1.
      
 0.402
NIPAL1
Magnesium transporter NIPA3.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.