Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG12 | ATG5 | ENSCJAP00000059203 | ENSCJAP00000011649 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.999 |
ATG12 | DDX58 | ENSCJAP00000059203 | ENSCJAP00000014513 | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | Putative ATP-dependent RNA helicase DDX58. | 0.971 |
ATG5 | ATG12 | ENSCJAP00000011649 | ENSCJAP00000059203 | Autophagy protein 5; Involved in autophagic vesicle formation. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.999 |
ATG5 | DDX58 | ENSCJAP00000011649 | ENSCJAP00000014513 | Autophagy protein 5; Involved in autophagic vesicle formation. | Putative ATP-dependent RNA helicase DDX58. | 0.971 |
CYLD | DDX58 | ENSCJAP00000003176 | ENSCJAP00000014513 | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | Putative ATP-dependent RNA helicase DDX58. | 0.963 |
CYLD | DHX58 | ENSCJAP00000003176 | ENSCJAP00000051323 | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | Putative ATP-dependent RNA helicase DHX58. | 0.465 |
CYLD | ISG15 | ENSCJAP00000003176 | ENSCJAP00000021002 | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | ISG15 ubiquitin like modifier. | 0.654 |
CYLD | OASL | ENSCJAP00000003176 | ENSCJAP00000076692 | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | 2'-5'-oligoadenylate synthetase like. | 0.581 |
CYLD | RNF125 | ENSCJAP00000003176 | ENSCJAP00000077491 | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | Uncharacterized protein. | 0.427 |
DDX58 | ATG12 | ENSCJAP00000014513 | ENSCJAP00000059203 | Putative ATP-dependent RNA helicase DDX58. | Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. | 0.971 |
DDX58 | ATG5 | ENSCJAP00000014513 | ENSCJAP00000011649 | Putative ATP-dependent RNA helicase DDX58. | Autophagy protein 5; Involved in autophagic vesicle formation. | 0.971 |
DDX58 | CYLD | ENSCJAP00000014513 | ENSCJAP00000003176 | Putative ATP-dependent RNA helicase DDX58. | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | 0.963 |
DDX58 | DHX58 | ENSCJAP00000014513 | ENSCJAP00000051323 | Putative ATP-dependent RNA helicase DDX58. | Putative ATP-dependent RNA helicase DHX58. | 0.988 |
DDX58 | EIF2AK2 | ENSCJAP00000014513 | ENSCJAP00000006979 | Putative ATP-dependent RNA helicase DDX58. | Eukaryotic translation initiation factor 2 alpha kinase 2. | 0.949 |
DDX58 | ISG15 | ENSCJAP00000014513 | ENSCJAP00000021002 | Putative ATP-dependent RNA helicase DDX58. | ISG15 ubiquitin like modifier. | 0.994 |
DDX58 | OASL | ENSCJAP00000014513 | ENSCJAP00000076692 | Putative ATP-dependent RNA helicase DDX58. | 2'-5'-oligoadenylate synthetase like. | 0.973 |
DDX58 | RNF125 | ENSCJAP00000014513 | ENSCJAP00000077491 | Putative ATP-dependent RNA helicase DDX58. | Uncharacterized protein. | 0.955 |
DDX58 | RNF135 | ENSCJAP00000014513 | ENSCJAP00000044095 | Putative ATP-dependent RNA helicase DDX58. | RING-type domain-containing protein. | 0.949 |
DDX58 | TRIM25 | ENSCJAP00000014513 | ENSCJAP00000025635 | Putative ATP-dependent RNA helicase DDX58. | Tripartite motif containing 25. | 0.963 |
DHX58 | CYLD | ENSCJAP00000051323 | ENSCJAP00000003176 | Putative ATP-dependent RNA helicase DHX58. | Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family. | 0.465 |
page 1 of 3