STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2Selenocysteine insertion sequence-binding protein 2. (851 aa)    
Predicted Functional Partners:
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
    
 0.873
HSPA5
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.794
ANKRD45
ANK_REP_REGION domain-containing protein.
   
 0.794
SCLY
Selenocysteine lyase.
     
 0.783
SEPSECS
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.759
TXNRD1
Thioredoxin reductase 1.
   
 0.736
CALR
Calreticulin.
   
 0.716
CALR3
Calreticulin.
   
 0.716
ERO1B
Endoplasmic reticulum oxidoreductase 1 beta.
   
 0.707
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.707
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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