STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PADI2Protein-arginine deiminase type-2. (665 aa)    
Predicted Functional Partners:
GLDN
Gliomedin.
      
 0.561
MMP21
Matrix metallopeptidase 21; Belongs to the peptidase M10A family.
      
 0.508
CPS1
Carbamoyl-phosphate synthase 1.
      
 0.470
ST8SIA1
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
      
 0.429
PADI6
Peptidyl arginine deiminase 6.
   
  0.413
PADI1
Peptidyl arginine deiminase 1.
   
  0.413
PADI3
Protein-arginine deiminase type-3.
   
  0.413
BCAR3
Breast cancer anti-estrogen resistance protein 3 isoform 1.
      
 0.410
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.