STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CELF3Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
MBNL1
Muscleblind-like protein 1 isoform c.
      
 0.629
CLCN1
Chloride channel protein.
      
 0.605
EWSR1
RNA-binding protein EWS isoform 1.
      
 0.573
PCBP1
Poly(RC)-binding protein 1.
    
 
 0.570
CEBPD
CCAAT/enhancer-binding protein.
     
 0.566
SLITRK4
SLIT and NTRK like family member 4.
    
 
 0.561
MBNL3
Muscleblind like splicing regulator 3.
      
 0.548
SLITRK2
SLIT and NTRK like family member 2.
   
 
 0.514
PCBP2
Poly(rC) binding protein 2.
    
 
 0.506
PTBP1
Polypyrimidine tract-binding protein 1 isoform a.
      
 0.469
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.