STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A17Uncharacterized protein. (1107 aa)    
Predicted Functional Partners:
LCN2
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
    
 0.931
SLC22A18
Solute carrier family 22 member 18.
   
  
 0.687
SLC2A8
Solute carrier family 2, facilitated glucose transporter member 8 isoform 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.647
SLC16A9
Solute carrier family 16 member 9.
   
 
 0.521
STXBP6
Syntaxin binding protein 6.
      
 0.489
ENSCJAP00000075442
Integrator complex subunit 1.
    
 0.480
COCH
Cochlin.
    
 
 0.472
INTS11
Integrator complex subunit 11.
    
 0.468
INTS4
Integrator complex subunit 4.
    
 0.461
INTS3
Integrator complex subunit 3.
    
 0.460
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.