Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
SYT11Synaptotagmin 11. (426 aa)    
Predicted Functional Partners:
SYT1
Synaptotagmin-1.
   
 0.812
SYT2
Synaptotagmin 2.
   
 0.809
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
   
 0.749
DDRGK1
DDRGK domain containing 1.
      
 0.692
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.692
MCCC1
Methylcrotonoyl-CoA carboxylase 1.
      
 0.689
APLP2
Amyloid-like protein 2 isoform 1.
   
 
 0.686
VAMP8
Vesicle associated membrane protein 8.
    
 0.677
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.662
VAMP3
Vesicle associated membrane protein 3.
    
 0.656
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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