STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARP15Poly [ADP-ribose] polymerase. (614 aa)    
Predicted Functional Partners:
DTX3L
Deltex E3 ubiquitin ligase 3L.
 
 
 0.881
RNF213
Ring finger protein 213.
   
 
 0.801
CDC42SE2
CDC42 small effector protein 2.
      
 0.778
IFIH1
Interferon induced with helicase C domain 1.
   
 
 0.766
RTP4
Receptor transporter protein 4.
   
  
 0.733
PARP9
Poly(ADP-ribose) polymerase family member 9.
  
 
0.719
PARP4
Poly [ADP-ribose] polymerase.
    
 
 0.705
DHX58
Putative ATP-dependent RNA helicase DHX58.
   
 
 0.634
TRANK1
Tetratricopeptide repeat and ankyrin repeat containing 1.
   
 
 0.595
ETV7
ETS variant 7.
   
  
 0.594
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.