Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DTX3LDeltex E3 ubiquitin ligase 3L. (745 aa)    
Predicted Functional Partners:
PARP9
Poly(ADP-ribose) polymerase family member 9.
   
 0.998
PARP15
Poly [ADP-ribose] polymerase.
   
 0.948
PARP14
Poly [ADP-ribose] polymerase.
   
 0.947
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.921
FAM162A
Family with sequence similarity 162 member A.
   
 0.872
DDX58
Putative ATP-dependent RNA helicase DDX58.
   
 0.776
STAT1
Signal transducer and activator of transcription.
   
 0.765
NOTCH1
Notch receptor 1.
    
 0.739
NUDCD1
NudC domain-containing protein 1 isoform 1.
    
   0.733
IFIH1
Interferon induced with helicase C domain 1.
   
 0.733
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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