STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD63Tetraspanin. (238 aa)    
Predicted Functional Partners:
LAMP2
Lysosome-associated membrane glycoprotein 2 isoform C.
    
 0.921
SCARB2
Lysosome membrane protein 2 isoform 1; Belongs to the CD36 family.
     
 0.920
LAMP1
Lysosomal associated membrane protein 1.
   
 0.876
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 
 0.844
TSG101
Uncharacterized protein.
      
 0.830
CD81
Tetraspanin.
    
 
0.829
CD9
Tetraspanin.
   
 
0.775
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.763
SDCBP
Syntenin-1 isoform 1.
   
 0.753
CD82
Tetraspanin.
    
 
0.743
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.