STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSIG2V-set and immunoglobulin domain containing 2. (460 aa)    
Predicted Functional Partners:
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
   0.531
CDH5
Cadherin-5 preproprotein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 0.521
COG3
Component of oligomeric golgi complex 3.
    
   0.516
TSTA3
Epimerase domain-containing protein.
      
 0.505
ENSCJAP00000069250
Uncharacterized protein.
      
 0.505
RITA1
RBPJ interacting and tubulin associated 1.
  
     0.436
SWSAP1
SWIM-type zinc finger 7 associated protein 1.
  
     0.433
COG5
Component of oligomeric golgi complex 5.
    
   0.424
SEMA4F
Semaphorin-4F isoform 1; Belongs to the semaphorin family.
  
     0.417
CLDN5
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.416
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.