Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOMEZHomeobox and leucine zipper encoding. (549 aa)    
Predicted Functional Partners:
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.670
SMYD1
SET and MYND domain-containing protein 1.
   
  0.548
CMYA5
Cardiomyopathy associated 5.
  
 
 0.533
DCP1B
Decapping mRNA 1B.
    
 
 0.494
TBC1D31
TBC1 domain family member 31.
    
 0.488
ZHX3
Zinc fingers and homeoboxes 3.
    
 
 0.461
ENSCJAP00000067517
Family with sequence similarity 83 member A.
      
 0.457
BARHL1
Uncharacterized protein.
    
 0.424
DMBX1
Diencephalon/mesencephalon homeobox 1.
    
 0.417
ALOX5
Arachidonate 5-lipoxygenase.
    
 0.403
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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