STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (1101 aa)    
Predicted Functional Partners:
TLNRD1
Mesoderm development candidate 1.
    
 0.904
MESD
Mesoderm development LRP chaperone.
    
 
 0.902
CIB2
Calcium and integrin-binding family member 2 isoform 1.
    
 0.901
CIB3
Calcium and integrin binding family member 3.
    
 0.858
FSCN3
Fascin.
      
 0.780
TMIE
Transmembrane inner ear.
     
 0.520
SRRM4
Serine/arginine repetitive matrix 4.
    
 0.508
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.493
RPGRIP1L
RPGRIP1 like.
    
 0.491
LHFPL4
Lipoma HMGIC fusion partner-like 4 protein.
   
 
 0.490
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.