Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMC3Transmembrane channel-like protein. (1101 aa)    
Predicted Functional Partners:
TLNRD1
Mesoderm development candidate 1.
    
 0.920
MESD
Mesoderm development LRP chaperone.
    
 
 0.919
CIB2
Calcium and integrin-binding family member 2 isoform 1.
    
 0.843
FSCN3
Fascin.
      
 0.821
CIB3
Calcium and integrin binding family member 3.
    
 0.760
LHFPL5
LHFPL tetraspan subfamily member 5.
   
 0.674
ERMARD
ER membrane associated RNA degradation.
    
 
 0.603
PRDM12
PR domain zinc finger protein 12; Involved in the positive regulation of histone H3-K9 dimethylation; Belongs to the class V-like SAM-binding methyltransferase superfamily.
   
 0.580
STOX1
Storkhead box 1.
      
 0.567
COCH
Cochlin.
    
 0.557
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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