STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPPLY1Ripply transcriptional repressor 1. (153 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
      
 0.578
TLE5
TLE family member 5, transcriptional modulator.
    
 
 0.574
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.570
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.569
CCDC40
Coiled-coil domain containing 40.
      
 0.562
MESP2
Uncharacterized protein.
      
 0.542
SEMA7A
Semaphorin-7A isoform 1 preproprotein; Belongs to the semaphorin family.
      
 0.508
TLE3
TLE family member 3, transcriptional corepressor.
    
 
 0.497
TLE2
TLE family member 2, transcriptional corepressor.
    
 
 0.463
ENSCJAP00000068726
TLE_N domain-containing protein.
    
 
 0.463
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.