STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPINK4Serine peptidase inhibitor, Kazal type 4. (86 aa)    
Predicted Functional Partners:
TAGAP
T cell activation RhoGTPase activating protein.
      
 0.821
ITLN1
Intelectin 1.
   
  
 0.751
HLA-DOB
Major histocompatibility complex, class II, DO beta.
      
 0.699
SH2B3
SH2B adaptor protein 3.
      
 0.624
HLA-DMB
HLA class II histocompatibility antigen, DM beta chain.
      
 0.620
LPP
LIM domain containing preferred translocation partner in lipoma.
      
 0.604
REG4
Regenerating family member 4.
   
  
 0.589
PSMB9
Proteasome subunit beta.
      
 0.564
PLA2G1B
Phospholipase A(2).
   
  
 0.533
RGS1
Regulator of G-protein signaling 1.
      
 0.517
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.