STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (389 aa)    
Predicted Functional Partners:
CACNB4
Voltage-dependent L-type calcium channel subunit beta-4 isoform c.
      
 0.699
MYO3A
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.686
RYR2
Ryanodine receptor 2.
      
 0.666
DMRTA1
DMRT like family A1.
      
 0.644
GRIN2A
Glutamate [NMDA] receptor subunit epsilon-1 isoform 2.
   
  
 0.637
ENSCJAP00000053202
RRM domain-containing protein.
  
 0.607
TRA2A
Transformer-2 protein homolog alpha.
  
 0.603
PDE4D
Phosphodiesterase.
      
 0.601
RBFOX3
RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events.
  
 0.584
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.581
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.