STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7HUV6_CALJANR LBD domain-containing protein. (161 aa)    
Predicted Functional Partners:
RORC
Uncharacterized protein.
 
      0.897
NCOR2
Nuclear receptor corepressor 2.
    
 0.825
NCOA1
Nuclear receptor coactivator.
    
 0.774
NCOA2
Nuclear receptor coactivator.
    
 0.725
NCOR1
Nuclear receptor corepressor 1.
    
 0.624
NPAS2
Neuronal PAS domain-containing protein 2.
    
 0.583
ARNTL
Aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform a.
    
 0.535
CLOCK
Circadian locomoter output cycles protein kaput.
    
 0.506
EP300
E1A binding protein p300.
    
 0.501
PASD1
PAS domain containing repressor 1.
    
 0.464
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.