STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FHL2Four and a half LIM domains 2. (403 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.921
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.913
LEF1
Lymphoid enhancer binding factor 1.
      
 0.699
CTNNB1
Catenin beta 1.
    
 
 0.672
TTN
Titin.
   
 
 0.645
ZNF518B
Zinc finger protein 518B.
    
 
 0.628
EGFR
Receptor protein-tyrosine kinase.
   
 
 0.625
GNPNAT1
Glucosamine 6-phosphate N-acetyltransferase.
      
 0.619
CARD8
Caspase recruitment domain family member 8.
    
 
 0.588
CAVIN1
Polymerase I and transcript release factor.
   
   0.553
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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