STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7IST4_CALJATFIIS N-terminal domain-containing protein. (551 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.970
F7HV22_CALJA
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.751
ENSCJAP00000052967
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.751
ENSCJAP00000054818
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.751
ENSCJAP00000063987
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.751
RPL18
Ribosomal protein L18.
   
   0.732
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.722
RPL35
Ribosomal protein L35.
    
   0.714
WDR61
WD repeat-containing protein 61.
    
 0.713
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.712
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.