STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND5BDENN domain containing 5B. (1309 aa)    
Predicted Functional Partners:
SLC24A3
Sodium/potassium/calcium exchanger 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.900
ITFG1
T-cell immunomodulatory protein.
      
 0.898
SLC35D2
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter.
 
      0.704
SLC35D1
UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter.
 
      0.643
EVPL
Envoplakin.
      
 0.623
DENND1C
DENN domain containing 1C.
    
 
0.583
PPL
Periplakin.
      
 0.567
DENND4B
DENN domain containing 4B.
    
 
0.554
DENND4C
DENN domain containing 4C.
    
 
0.479
WIPF2
WAS/WASL-interacting protein family member 2.
      
 0.461
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.