Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
IFFO1Intermediate filament family orphan 1 isoform 5; Belongs to the intermediate filament family. (572 aa)    
Predicted Functional Partners:
ALDH4A1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
      0.815
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
      
 0.779
TAOK2
Serine/threonine-protein kinase TAO2 isoform 1.
      
 0.772
PIDD1
P53-induced death domain protein 1.
      
 0.699
EIF2AK4
Eukaryotic translation initiation factor 2-alpha kinase 4.
      
 0.699
DCLRE1C
DNA cross-link repair 1C.
      
 0.696
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
      
 0.627
HDAC10
Histone deacetylase 10.
      
 0.620
SMC5
Structural maintenance of chromosomes 5.
      
 0.601
TCF19
Transcription factor 19.
      
 0.547
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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