STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROBO4Roundabout guidance receptor 4. (1007 aa)    
Predicted Functional Partners:
SLIT2
Slit guidance ligand 2.
   
 0.968
SLIT3
Slit homolog 3 protein isoform 2.
   
 0.934
SLIT1
Slit guidance ligand 1.
   
 0.922
CPN2
Carboxypeptidase N subunit 2.
   
 0.749
NYX
Nyctalopin.
   
 0.744
GIT1
ARF GTPase-activating protein GIT1 isoform 1.
      
 0.689
SOX18
SRY-box transcription factor 18.
   
  
 0.689
LRRC3C
Leucine rich repeat containing 3C.
   
 0.689
LRRC70
Uncharacterized protein.
   
 0.689
LRTM2
Leucine-rich repeat and transmembrane domain-containing protein 2.
   
 0.689
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.