STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TEX11Testis expressed 11. (925 aa)    
Predicted Functional Partners:
MSH4
MutS homolog 4.
   
  
 0.667
RNF212B
Ring finger protein 212B.
    
 
 0.658
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.651
FANCM
FA complementation group M.
      
 0.646
SYCP2
Synaptonemal complex protein 2.
      
 0.635
MSH5
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.631
SPATA32
Spermatogenesis associated 32.
    
 
 0.624
TMEM126B
Transmembrane protein 126B isoform a.
      
 0.610
KIAA1328
KIAA1328.
      
 0.610
KRTAP24-1
Keratin associated protein 24-1.
      
 0.596
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.