STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLRP4NLR family pyrin domain containing 4. (712 aa)    
Predicted Functional Partners:
DTX4
E3 ubiquitin-protein ligase DTX4.
    
 0.835
ENSCJAP00000069982
Uncharacterized protein.
 
  
 
 0.760
OOEP
Oocyte expressed protein homolog (Predicted).
    
 
 0.759
TBK1
TANK binding kinase 1.
    
 0.757
PADI6
Peptidyl arginine deiminase 6.
    
 
 0.648
ZBED3
Zinc finger BED domain-containing protein 3.
    
 
 0.648
DTX1
Deltex E3 ubiquitin ligase 1.
    
 0.639
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.604
BCL2L10
Uncharacterized protein.
    
 0.595
TUBA4A
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
  0.589
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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