STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEBLNebulette. (977 aa)    
Predicted Functional Partners:
MYPN
Myopalladin isoform a.
   
 0.628
ASPH
Aspartate beta-hydroxylase.
   
  
 0.628
XIRP2
Xin actin binding repeat containing 2.
   
 0.609
PEX6
Peroxisomal biogenesis factor 6.
    
 0.605
TTN
Titin.
   
 0.574
PEX16
Peroxisomal membrane protein PEX16.
      
 0.569
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
      
 0.563
FREM2
FRAS1 related extracellular matrix 2.
   
  
 0.516
NSD1
Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific isoform b.
   
 
 0.510
MEOX2
Mesenchyme homeobox 2.
      
 0.504
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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