STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2; Belongs to the peptidase C2 family. (672 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
   
 0.973
TLN1
Talin 1.
   
 0.942
CAPNS1
Calpain small subunit 1.
   
0.933
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
   
 0.930
TLN2
Talin-2.
   
 0.926
CDK5R1
Cyclin-dependent kinase 5 activator.
   
 
 0.915
BAX
BCL2 associated X, apoptosis regulator.
   
 0.907
BAK1
BCL2 antagonist/killer 1.
   
 0.905
IL1A
Interleukin-1; Belongs to the IL-1 family.
   
 
  0.901
ITSN2
Intersectin 2.
   
 
 0.599
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.