Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F7GZS3_CALJAUncharacterized protein. (214 aa)    
Predicted Functional Partners:
AGER
Advanced glycosylation end-product specific receptor.
    
 0.982
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
    
 0.974
BECN1
Beclin-1.
    
 0.944
BECN2
Beclin 2.
    
 0.944
HMGB2
High mobility group protein B2.
   
  0.819
HMGB4
High mobility group box 4.
   
  0.819
LY96
Lymphocyte antigen 96.
    
 0.699
SP100
SP100 nuclear antigen.
   
  0.664
SEC23IP
SEC23 interacting protein.
   
   0.610
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1.
   
 0.604
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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