STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FDPSFarnesyl pyrophosphate synthase isoform a; Belongs to the FPP/GGPP synthase family. (419 aa)    
Predicted Functional Partners:
IDI1
Isopentenyl-diphosphate Delta-isomerase 1.
 
 
 0.980
MVD
Mevalonate diphosphate decarboxylase.
  
 0.974
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
    
 0.974
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.968
PDSS2
Decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
    
 0.943
DHDDS
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.940
NUS1
Nogo-B receptor.
  
 
 0.936
ENSCJAP00000073271
Uncharacterized protein.
  
 
 0.936
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.930
RSAD2
Radical S-adenosyl methionine domain-containing protein 2.
     
 0.922
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.