STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYATL1Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
SKP2
S-phase kinase associated protein 2.
   
 0.747
KAT2A
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
  
 0.568
CCNA2
Cyclin-A2; Belongs to the cyclin family.
   
 0.563
CCNF
Cyclin F; Belongs to the cyclin family.
   
 0.563
CCNA1
Cyclin A1; Belongs to the cyclin family.
   
 0.563
CCNJL
Cyclin J like; Belongs to the cyclin family.
   
 0.563
CCNJ
Cyclin-J isoform 1; Belongs to the cyclin family.
   
 0.563
ESCO1
Establishment of sister chromatid cohesion N-acetyltransferase 1.
   
  
 0.559
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
  
 0.558
KAT2B
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
   
  
 0.557
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.