STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13BCoagulation factor XIII B chain. (663 aa)    
Predicted Functional Partners:
F13A1
Coagulation factor XIII A chain.
    
 0.993
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.981
HRG
Histidine rich glycoprotein.
   
 0.903
ENSCJAP00000063656
Fib_alpha domain-containing protein.
   
 0.892
FGG
Fibrinogen gamma chain.
   
 0.881
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
   
 
 0.851
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
 
 0.835
TGM1
Protein-glutamine gamma-glutamyltransferase K.
    
 0.833
PROZ
Protein Z, vitamin K dependent plasma glycoprotein; Belongs to the peptidase S1 family.
   
 0.823
FGB
Fibrinogen beta chain.
   
 0.800
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.