STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F13BCoagulation factor XIII B chain. (663 aa)    
Predicted Functional Partners:
F13A1
Coagulation factor XIII A chain.
    
 0.999
F2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.995
TGM1
Protein-glutamine gamma-glutamyltransferase K.
    
 0.944
SERPIND1
Serpin family D member 1; Belongs to the serpin family.
   
 
 0.938
HRG
Histidine rich glycoprotein.
   
 0.928
FGG
Fibrinogen gamma chain.
   
 0.907
ENSCJAP00000063656
Fib_alpha domain-containing protein.
   
 0.894
SERPINC1
Serpin family C member 1; Belongs to the serpin family.
   
 
 0.872
F5
Coagulation factor V; Belongs to the multicopper oxidase family.
   
 
 0.864
PROC
Protein C, inactivator of coagulation factors Va and VIIIa.
   
 0.845
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.