STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR37WD repeat domain 37. (575 aa)    
Predicted Functional Partners:
PACS1
Phosphofurin acidic cluster sorting protein 1.
    
 
 0.913
PACS2
Phosphofurin acidic cluster sorting protein 2.
    
 
 0.812
RNF121
RING finger protein 121.
      
 0.773
IFT140
Intraflagellar transport 140.
    
 0.754
WDR48
WD repeat domain 48.
    
 0.701
WDR63
WD repeat domain 63.
     
 0.686
WDR78
WD repeat domain 78.
     
 0.641
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.639
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.620
LRRC45
Leucine-rich repeat-containing protein 45.
   
  
 0.618
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.