STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A12Solute carrier family 39 member 12. (691 aa)    
Predicted Functional Partners:
NSUN6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.596
SLC30A2
Solute carrier family 30 member 2.
   
 
 0.569
ARL5B
ADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family.
      
 0.563
SLC16A8
Solute carrier family 16 member 8.
      
 0.534
SLC39A1
Solute carrier family 39 member 1.
   
 0.532
SLC39A9
Solute carrier family 39 member 9.
    
 
0.525
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
      
 0.514
TPH1
Tryptophan hydroxylase 1.
    
 
 0.511
WDR49
WD repeat domain 49.
      
 0.508
TTC30A
Uncharacterized protein.
      
 0.502
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.