STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK2Dual specificity protein kinase CLK2; Belongs to the protein kinase superfamily. (499 aa)    
Predicted Functional Partners:
CLK3
CDC like kinase 3.
  
 
  
0.657
PHF12
PHD finger protein 12 isoform 1.
   
   0.644
RSRP1
Arginine and serine rich protein 1.
   
 
 0.606
PRKCQ
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
      
 0.568
BCLAF1
Uncharacterized protein.
    
 
 0.560
CLK1
CDC like kinase 1; Belongs to the protein kinase superfamily.
  
 
  
0.546
RBBP6
Uncharacterized protein.
   
   0.546
SNIP1
Smad nuclear interacting protein 1.
    
   0.539
SRSF8
Serine and arginine rich splicing factor 8.
    
 
 0.537
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 
 0.518
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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