STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK2Dual specificity protein kinase CLK2; Belongs to the protein kinase superfamily. (499 aa)    
Predicted Functional Partners:
CLK1
CDC like kinase 1; Belongs to the protein kinase superfamily.
   
   0.899
CLK3
CDC like kinase 3.
    
   0.894
RSRP1
Arginine and serine rich protein 1.
   
 
 0.894
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 
 0.858
RBBP6
Uncharacterized protein.
   
   0.843
BCLAF1
Uncharacterized protein.
    
 
 0.842
SNIP1
Smad nuclear interacting protein 1.
    
   0.840
SRSF8
Serine and arginine rich splicing factor 8.
   
 
 0.823
PNN
Pinin.
   
 
 0.807
YTHDC1
YTH domain containing 1.
   
   0.804
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.