STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRINP2BMP/retinoic acid inducible neural specific 2. (783 aa)    
Predicted Functional Partners:
CXXC5
CXXC-type zinc finger protein 5.
      
 0.778
SLIT3
Slit homolog 3 protein isoform 2.
   
  
 0.707
RGMA
Repulsive guidance molecule BMP co-receptor a.
      
 0.702
NKPD1
NTPase KAP family P-loop domain containing 1.
      
 0.619
APMAP
Uncharacterized protein.
      
 0.591
CRTAC1
Cartilage acidic protein 1.
   
  
 0.564
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
  
 0.551
CDH6
Cadherin-6 preproprotein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 0.524
CDH12
Cadherin-12 preproprotein; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.523
KIRREL3
Kirre like nephrin family adhesion molecule 3.
      
 0.516
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.