Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IGKV5-2Immunoglobulin kappa variable 5-2. (137 aa)    
Predicted Functional Partners:
JCHAIN
Uncharacterized protein.
   
 0.659
QSOX1
Sulfhydryl oxidase.
     
 0.562
MYMK
Myomaker, myoblast fusion factor.
    
   0.437
NGF
Nerve growth factor; Belongs to the NGF-beta family.
    
   0.437
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
   0.437
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
    
 0.427
F7CRH2_CALJA
Ig-like domain-containing protein.
   
 0.421
ENSCJAP00000073753
Ig-like domain-containing protein.
  
  0.407
ENSCJAP00000073541
Ig-like domain-containing protein.
  
  0.404
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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