STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore associated complex subunit 1. (149 aa)    
Predicted Functional Partners:
SKA3
Spindle and kinetochore associated complex subunit 3.
   
 
 0.961
SKA2
Spindle and kinetochore-associated protein 2 isoform 1.
   
 
 0.891
ENSCJAP00000066623
SKA2 domain-containing protein.
   
 
 0.891
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.855
NDC80
NDC80 kinetochore complex component.
   
 
 0.853
ESPL1
Extra spindle pole bodies like 1, separase.
   
 
 0.824
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.812
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.795
BUB1B
Uncharacterized protein.
   
 
 0.791
PLK1
Serine/threonine-protein kinase PLK.
   
 
 0.771
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.