STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOD1Nucleotide-binding oligomerization domain-containing protein 1. (953 aa)    
Predicted Functional Partners:
RIPK2
Receptor-interacting serine/threonine-protein kinase 2; Serine/threonine/tyrosine kinase that plays an essential role in modulation of innate and adaptive immune responses. Upon stimulation by bacterial peptidoglycans, NOD1 and NOD2 are activated, oligomerize and recruit RIPK2 through CARD-CARD domains.
   
 0.996
ATG16L1
Autophagy related 16 like 1.
    
 0.973
SUGT1-2
Uncharacterized protein.
    
 0.938
NOD2
Nucleotide binding oligomerization domain containing 2.
   
0.842
ENSCJAP00000059313
Uncharacterized protein.
    
 0.811
UBA52
Ubiquitin-like domain-containing protein.
   
  0.792
CASP1
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.776
LOC100411827
Ubiquitin-like domain-containing protein.
   
  0.706
UBC
Uncharacterized protein.
    
 0.702
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.677
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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