STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM82Transmembrane protein 82. (342 aa)    
Predicted Functional Partners:
SPATA3
Spermatogenesis associated 3.
      
 0.644
NTAN1
N-terminal asparagine amidase.
      
 0.608
FAM131C
Family with sequence similarity 131 member C.
  
   
 0.603
CEP78
Centrosomal protein 78.
      
 0.580
SH3BP4
SH3 domain-binding protein 4.
      
 0.577
CEP250
Centrosomal protein 250.
      
 0.572
CEP41
Centrosomal protein 41.
      
 0.569
FBLIM1
Filamin-binding LIM protein 1 isoform a.
 
    
 0.549
SCN10A
Sodium voltage-gated channel alpha subunit 10.
      
 0.495
ENSCJAP00000075982
Matrin-type domain-containing protein.
      
 0.469
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.