STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PET100PET100 cytochrome c oxidase chaperone. (73 aa)    
Predicted Functional Partners:
C19H1orf31
Uncharacterized protein.
   
  
 0.741
F6SKH1_CALJA
Uncharacterized protein.
   
  
 0.730
NDUFB1
Uncharacterized protein.
   
  
 0.730
ENSCJAP00000068682
Uncharacterized protein.
   
  
 0.730
PUM1
Pumilio RNA binding family member 1.
    
 
 0.712
PUM2
Pumilio homolog 2.
    
 
 0.712
PNKD
PNKD metallo-beta-lactamase domain containing.
   
 
 0.664
PET117
Uncharacterized protein.
   
 
 0.655
ENSCJAP00000064292
Uncharacterized protein.
   
 
 0.655
MCEMP1
Mast cell expressed membrane protein 1.
      
 0.639
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.