STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPHA6EPH receptor A6. (1129 aa)    
Predicted Functional Partners:
EFNA5
Ephrin-A5; Belongs to the ephrin family.
   
 0.974
EFNA3
Ephrin-A3; Belongs to the ephrin family.
   
 0.939
EFNA1
Ephrin-A1 isoform a; Belongs to the ephrin family.
   
 0.930
NGEF
Neuronal guanine nucleotide exchange factor.
    
 0.929
EFNA4
Ephrin-A4 isoform a; Belongs to the ephrin family.
   
 0.921
RASA1
RAS p21 protein activator 1.
   
 0.919
ABL1
Tyrosine-protein kinase.
   
0.912
ITSN2
Intersectin 2.
   
 0.757
EFNB2
Ephrin-B2; Belongs to the ephrin family.
   
 0.733
EFNB1
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
 0.721
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.