STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM13Tripartite motif containing 13. (409 aa)    
Predicted Functional Partners:
SPRYD7
SPRY domain-containing protein 7 isoform 1.
   
 
 0.858
ECSIT
Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial isoform 1.
   
 
 0.588
UGGT1
UDP-glucose glycoprotein glucosyltransferase 1.
    
 
 0.578
EIF2AK3
Eukaryotic translation initiation factor 2-alpha kinase 3.
    
 0.569
UBQLN4
Ubiquilin-4.
    
 0.543
TXNDC5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
   
 0.539
TRIM40
Tripartite motif containing 40.
      
 0.529
DDX20
DEAD-box helicase 20.
    
 
 0.528
PDYN
Prodynorphin.
      
 0.516
TRIM29
Tripartite motif containing 29.
      
 0.511
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.