Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC7A7Solute carrier family 7 member 7. (511 aa)    
Predicted Functional Partners:
SLC3A2
Solute carrier family 3 member 2.
   
 0.978
SLC7A6
Solute carrier family 7 member 6.
   
 
 0.925
SLC3A1
Solute carrier family 3 member 1.
   
 0.773
MAPK8IP2
Mitogen-activated protein kinase 8 interacting protein 2.
      
 0.521
SLC33A1
Solute carrier family 33 member 1.
   
 
 0.500
ALKBH2
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 isoform 1.
   
 0.500
ALKBH3
AlkB homolog 3, alpha-ketoglutaratedependent dioxygenase.
   
 0.500
KIAA0513
KIAA0513.
   
 0.500
SLC23A1
Solute carrier family 23 member 1.
   
  
 0.480
NCDN
Neurochondrin.
      
 0.475
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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